Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829805.1_cds_XP_016503920.1_17417
CDS Infomation

[gene=LOC107821955] [db_xref=GeneID:107821955] [protein=uncharacterized protein LOC107821955] [partial=5'] [protein_id=XP_016503920.1] [location=<5..3874] [gbkey=CDS]
Sequence

TGTCAAATTGGGGATCAAACATGTAGCATTCCCTTTGAATTGTATGATCTTTCGGGGCTT
GGCGATGTGTTGTCATTGGATGTTTGGAATGAGGTGTTGTCTGAGGAAGAAAGGTTTAAT
CTTGCTCAGTTTCTTCCTGACATGGACCAGGAAACGTTCATGAGAACGTTGAAAGACCTT
CTCGCGGGTGATAATTTGCATTTTGGAAGTCCCATTGATAAGCTGTTTAACATGTTGAAG
GGCGGGTTATGTGAGCCGAGAGTGGCGCTTTATCGCCAAGGATTAATTTTCTTTCAGAAG
CGACAGCATTATCACCGCCTCAGAAACCATCAGAATGCAATTGTCAGTAATCTTTGTCAG
ATAAGAGATGCTTGGCTCAGTTGTCCAGGGTATAGTATTGAGGAGAAGCTGCAAGTGCTG
AACATTAAGAAGAACGAGAAGATTCTAATGTATGAGAAGATGGAAGAACTGGAAAGTGAT
GGATCCGAGAGAGAGGAATTTAGTGATAATTTGTGGGGCAAAAGAACAAAAGATCGGAAT
CTTGGGCAGGATATGGGCTGTTATTCTGGATATGGGAAAGGGTCAGCCTTGGATTCTTCT
TCTCTTAGGCAAATGGCTTCTTCGGAAGCTACCAGATACAGAAAGCAGAACCTAAGAGGG
ACATTCAAGGTAGGTGGAAATGGCTCAAAAGGAATGGAACTCAAATCATCTGGGCCATAT
GATTCTGCATTGCCTCTTTCTCGTCGTGCTAAAGGAATGGGCTATGATTCTGGGATGGCT
GTCCCAATGAGAGATCAGTTGAATGGCGACGATGAGGAGGATGGGATGTACGAAGTGGAC
GTGCAGAGAGAGAGAAACTTTTCACGAGCAGGGGCTGTTGATAAAAGTGGGAGTGTCAAA
TCGGGGAAGAAGCATGAAAGGGTTAGAATGGAAGAATGTGCTGATGTTTTCTTGGGCGTG
CCTATGCCTTTGAAGAATGATCCTTATGCCTACGGCAGGAACAATACTGTCAACCAGCTG
TCAGATATTAAGGTCTTGACCGCAAAGCCCAGCAATGCCAGAACTGCATATGATTTTGGG
AAAAAGGACAGGTATGCTGATGGTCTCCCACAGTTTGTCTCTGAAGAGCAGATGAATAAT
TATGGGAAAATCCGTATTCCCAAAGTGTCACTGAAGGGAAGTGGGATGGAACTAGCAGGT
GGAAGTGAACAGTTTTGGCCAAGTAAAGCACCAGAGGACACCTATTTTACCAACCCATCC
CATAAGTTTGGTAACTTGAATGTAAAAGGCAAAAAGTGGAAGGTGGATCAAGAATATCCT
GATCGCAAGTTCAACGATAAGTTGTTTCAGTCAGACTATAGGGCAAAGGCAGCCTTCCCT
GAGAAAGTCAGGGCAAAAATGCAGAATGGCGGACAAGATGCTTCCGGAACCAGAGGTAGA
AGGGTATTTGCGAATATTGAAGAAACTGAAACTGAATCATCAGAAAAAAGTGATGAGGAT
GAGGAATATAATCCATTAATGAGGAGCAAGTGGGCATATCCCAGTGGTTCCCCTAACTTG
ATGTCCGCATTGGATACTAAAAAGGTTAAATTTTCTCAAAAGGATAAGTGTAGTATTCCG
GCTCGTGATAGCTCATTTCATTCCTTTAGGATGGTGAATGACTCTGGTGAACTTCTCCAC
TCGAAGAAAACTGGAAGTCTTGGCTTGGGAGCAGAGCCGATGGGTAAGATGCATGATCTT
GGTCATTTGAGTAGTTTCTCCACCAGAAATTTGGCTAGAAATCATTTCTCTGGTCTAACC
CAGTTCAATAACAACAATGACGACGATGATGACGACGAGCAACCAATCTACAAGCTAGCC
AAGAATGGCCCTTTGCAAGGGGGCCATACTGAAAGGTTCCACATGGCATCCACCAGAGAG
AAGAAACATAAAGGAAAAGTTAGCCGTGATATCCTGCAGTCAAACTATATGCAAGATCAG
AAGTTTCAGGAGGATGACTCATTGCGGACACGGTTTCCGACTAAAAAAAGTGGAGTTTCT
GCCAAATTTTCAAAGAAAGGTCAGATGCTTGACACACGTGCTGGTGATCATCATGAAAAA
TCTAATGTGCTATTAACAGGTTGCAATTCAGTCATGAAGAAGCGGAAAGTCAAAACTGAT
ACCCCATACATGGATGAGCTAGATGGTACTGACCATCTCTATGCTGAAATCCAGCAGCGA
CAAGATGATCTGTCCACGAAGCGGGGTAAAAAGAAGCTGGAGGATGAATCATGGCCTTCT
TTAATGGGAGTTCCCAGATCTCCAACTTCAGAAATGATAGAAGATGTAGATGTGGAAAGC
CGACCTCCAAAAAAGCCATTCCCTTTGATTACCCCTACAGTTCATACTGGCTTCTCATTC
TCCATCATTCATCTTCTCTCAGCAGTTCGTATGGCAATGATTACTTTGCTTCCAGAAGAG
GCTGTAGATAGAAATGCTGGAAGACTGGATGCCGTGGAGGAGCATGGTATCAAGCAAGAA
GCTGTTAACGGAGTTGCACCACCTTCAGAGTTAGATGGTGACAATTCTCCACCTTCCACT
CAAGCAAATGTGCCCTCTCTCTGTGTGCAGGAAATTGTTAACCGTGTGAGATCAAACCCG
GGTGACCCCTGTATTCTTGAGACTCAAGAACCTCTCCATGATTTGGTCAGAGGAGTACTC
AAAATATTTTCTTCCAAAACAGCACCACTAGGTGCAAAAGGATGGAAGCCACTTGTGGTC
TATGAAAAAGCCACCAAAAGTTGGTCCTGGATTGGTCCCGTGAGTCCCGACTCATCTGAT
CATGAGCCTATGGAGGAAGTCACATCTCCAGAAGCGTGGGGTCTTCCCCATAAAATGCTT
GTGAAGTTAGTTGATTCGTTTGCCAATTGGCTGAAAAATGGTCAGGAAACGCTACGGCAG
ATAGGAAGTCTTCCTGACCCTCCGTTGTCATTGATGCAATATAATTTGGATGAGAAGGAA
CGGTTCAGGGACTTGCGAGCTCAGAAGAGTCTGAGTACCATTGGCCCAAGCTCTGAAGAA
GTCAGAGAGTATTTCCGGAAAGAGGAATTCCTTAGGTATTCAATTCCTGACAGGGCCTTC
TCCTACACTGCTATTGATGGGAAAAAATCAATAGTTGCTCCTCTGAGAAGATGCGGTGGC
AAGCCAACTTCAAAAGCCCGTGATCACTTTATGCTTAAAAAGGATCGTCCTGCCCATGTC
ACGATTCTCTGTCTTGTGCGAGATGCAGCTGCTAGGTTGCCTGGCAGTACAGGGACTAGA
GCAGATGTTTGCACTTTAATCAGAGACTCACAGTATATTGTGGAAGAGGTATCTGATGCT
CAAGTCAATCAAGTTGTTAGTGGTGCATTGGACCGTTTGCATTATGAACGTGATCCTTGT
GTACAGTTTGATAATGAGAAGAAGCTCTGGGTTTACTTACATAGAGATAGAGAAGAAGAA
GATTTTGAGGATGATGGTACTTCATCTACAAAGAAATGGAAGAGGCAAAAGAAAGAAGCT
CCCGAACCCTCTGACCAAGTAGCAGTGACCATTGCTTATCACGGCACAGGGGAACAAAAC
GGTTTTGATTTGAGTTCAGATCTCAATGTTGAGCCGTCAAACATGGATGAAGATCGAACA
GACCTTGCTTATGAGGATGTTAAGGATCAAGTGGAGGAAAACATTAAGAGCAGCCATGTG
TTAGAACAAGGTGCTACGCATTGTAGTTCTTCTCTGATGGATTGGGATACTCTTTGCTCA
ACTCCTGGAGAAGGAAATAAGTTGTTATGTCAGCAGAACTCTACTGATAATTTTGATGAT
GAAACGTGTGGTGGAGAACCACCTGCTTGA

Peptide Sequence

PEP ID

XP_016503920.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107821955, partial [Nicotiana tabacum]
Sequence

CQIGDQTCSIPFELYDLSGLGDVLSLDVWNEVLSEEERFNLAQFLPDMDQETFMRTLKDL
LAGDNLHFGSPIDKLFNMLKGGLCEPRVALYRQGLIFFQKRQHYHRLRNHQNAIVSNLCQ
IRDAWLSCPGYSIEEKLQVLNIKKNEKILMYEKMEELESDGSEREEFSDNLWGKRTKDRN
LGQDMGCYSGYGKGSALDSSSLRQMASSEATRYRKQNLRGTFKVGGNGSKGMELKSSGPY
DSALPLSRRAKGMGYDSGMAVPMRDQLNGDDEEDGMYEVDVQRERNFSRAGAVDKSGSVK
SGKKHERVRMEECADVFLGVPMPLKNDPYAYGRNNTVNQLSDIKVLTAKPSNARTAYDFG
KKDRYADGLPQFVSEEQMNNYGKIRIPKVSLKGSGMELAGGSEQFWPSKAPEDTYFTNPS
HKFGNLNVKGKKWKVDQEYPDRKFNDKLFQSDYRAKAAFPEKVRAKMQNGGQDASGTRGR
RVFANIEETETESSEKSDEDEEYNPLMRSKWAYPSGSPNLMSALDTKKVKFSQKDKCSIP
ARDSSFHSFRMVNDSGELLHSKKTGSLGLGAEPMGKMHDLGHLSSFSTRNLARNHFSGLT
QFNNNNDDDDDDEQPIYKLAKNGPLQGGHTERFHMASTREKKHKGKVSRDILQSNYMQDQ
KFQEDDSLRTRFPTKKSGVSAKFSKKGQMLDTRAGDHHEKSNVLLTGCNSVMKKRKVKTD
TPYMDELDGTDHLYAEIQQRQDDLSTKRGKKKLEDESWPSLMGVPRSPTSEMIEDVDVES
RPPKKPFPLITPTVHTGFSFSIIHLLSAVRMAMITLLPEEAVDRNAGRLDAVEEHGIKQE
AVNGVAPPSELDGDNSPPSTQANVPSLCVQEIVNRVRSNPGDPCILETQEPLHDLVRGVL
KIFSSKTAPLGAKGWKPLVVYEKATKSWSWIGPVSPDSSDHEPMEEVTSPEAWGLPHKML
VKLVDSFANWLKNGQETLRQIGSLPDPPLSLMQYNLDEKERFRDLRAQKSLSTIGPSSEE
VREYFRKEEFLRYSIPDRAFSYTAIDGKKSIVAPLRRCGGKPTSKARDHFMLKKDRPAHV
TILCLVRDAAARLPGSTGTRADVCTLIRDSQYIVEEVSDAQVNQVVSGALDRLHYERDPC
VQFDNEKKLWVYLHRDREEEDFEDDGTSSTKKWKRQKKEAPEPSDQVAVTIAYHGTGEQN
GFDLSSDLNVEPSNMDEDRTDLAYEDVKDQVEENIKSSHVLEQGATHCSSSLMDWDTLCS
TPGEGNKLLCQQNSTDNFDDETCGGEPPA

Transcript Sequence

Gene sequence data has not been registered.